Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015860891.1_cds_XP_016514753.1_27171
CDS Infomation

[gene=LOC107831502] [db_xref=GeneID:107831502] [protein=alpha-galactosidase 1-like] [protein_id=XP_016514753.1] [location=join(75141..75346,76831..76889,76999..77055,77438..77472,77556..77659,77736..77811,77896..77954,78050..78115,78223..78306,78381..78445,78792..78874,78973..79063,79198..79247,79335..79475,80491..80586)] [gbkey=CDS]
Sequence

ATGGAGATAAGAATAGGGACCAAGTTATTATTACTTGCATTATGCTTACTGATATCCGCC
GTGATTGGTGGTAACAGCCACCGTCTTACGGCAGATATGCGGTGGCAAGTTTTGAACCGA
CGGCAGCAGCAAAAGGAGAAAGAGGATTCAGTTGAAACACGACGCAGTTTGCTCTCCAAT
GGACTCGGTTTGACTCCTCCTATGGGGTGGAGTAGTTGGAATCATTTTGGCTGCAACATT
GATGAGAAAGTCATAAGAGAAACTGCTGATGCCCTGGTTTCAACTGGTCTTGATAAGCTG
GGGTATAAGTATGTCAATATAGATGATTGCTGGGCTGAACCTCAACGCGATGATCAGGGA
AATTTTGCACCTAAGAATTCCACATTTCCTTCTGGAATGAAAGCTCTAGCTGACTATGTT
CACAGTAAAGGTCTTAAGCTTGGAATCTACTCAGATGCAGGGTATTATACTTGCAGCAAG
AAAATGCCTGGTTCACTTGGTCATGAGGAACAAGATGCAAAAACTTTTGCAGCATGGGGT
ATTGATTATTTGAAGTATGATAATTGCAACCATGATGGAACAAAGCCTACTGTGCGATAT
CCTGTAATGACAAGAGCTCTAATGAACGCTGGACGGCCTATCTTCTTTAGTCTTTGTGAA
TGGGGCGACTTGCATCCGGCATTGTGGGGTGGCAAAGTAGGTAATAGCTGGAGAAACACA
AACGATATCTCTGATACATGGGAAAGCATGATATCTAGAGCAGACCAGAATGAAGTTTAT
GCAGACCTTGCAAGGCCTGGTGGCTGGAATGATCCCGACATGCTTGAGGTGGGAAATGGA
GGGATGACAAAGGATGAATACATTGTCCACTTCAGTCTCTGGGCTATTTCAAAGGCTCCC
CTTATCATTGGTTGTGATGTGAGAAATGTAACAAAGGATACCAAGGAAATACTTGCCAAC
AAGGAGGTCATTGCTGTAAACCAAGATGAATCAGGCGTCCAGGGCAAAAAGGTCAGAATG
GAAGGCGATATTGAGGTATGGGCAGGGCCTTTATCAGGCTATAGAGTAGCTTTAGTGCTT
CTCAACCGTGGTCCTCAGAAATATGAAATAACAGCACACTGGGATGACATTGGAATCCCT
CCTAACAGCGTCGTAGAGGCAAGAGATCTTTGGGAGCACAAGACATTGAAGACACGATTT
GAAGAGAATTTGACAGCTACAGTGAACTCTCATGCGTGCAAGATGTATGTATTGAAGCCT
ATTGCTTCATGA

Peptide Sequence

PEP ID

XP_016514753.1
PEP Infomation

PREDICTED: alpha-galactosidase 1-like [Nicotiana tabacum]
Sequence

MEIRIGTKLLLLALCLLISAVIGGNSHRLTADMRWQVLNRRQQQKEKEDSVETRRSLLSN
GLGLTPPMGWSSWNHFGCNIDEKVIRETADALVSTGLDKLGYKYVNIDDCWAEPQRDDQG
NFAPKNSTFPSGMKALADYVHSKGLKLGIYSDAGYYTCSKKMPGSLGHEEQDAKTFAAWG
IDYLKYDNCNHDGTKPTVRYPVMTRALMNAGRPIFFSLCEWGDLHPALWGGKVGNSWRNT
NDISDTWESMISRADQNEVYADLARPGGWNDPDMLEVGNGGMTKDEYIVHFSLWAISKAP
LIIGCDVRNVTKDTKEILANKEVIAVNQDESGVQGKKVRMEGDIEVWAGPLSGYRVALVL
LNRGPQKYEITAHWDDIGIPPNSVVEARDLWEHKTLKTRFEENLTATVNSHACKMYVLKP
IAS

Transcript Sequence

Gene sequence data has not been registered.